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Elizabeth Gallas
(Physicist, Database Coordinator, Metadata Architect)
working on ATLAS at CERN's LHC
for University of Oxford / Particle Physics Group
previous links: Elizabeth Gallas, Applications Physicist
with the FermiLab Computing Division
on the DØ Experiment
other: google(US/UK) | wikipedia | wiktionary | AngloGeneva
ebay(US/UK) | W(Oxford| Geneva ms u| WAurora) |
The Cult of Done Manifesto . | Creativity in Slowing Down (vujade)(Adam Grant) | The Procrastinator Brain(Tim Urban)
Anglo-EU_Translation_Guide

Oxford Projects and Links:

Frequent ATLAS Links:

Do you think there is a Database infrastructure problem ?

Links to sections:


Overview Applications/Systems using Databases

Application Indico HyperNews(E-Groups) TWiki(s) | TreeNoLB Other Links
Metadata: Meta Data
Database Domain Indico
Users: Forum
hn-atlas-physicsMetadata
DatasetNomenclature MetadataCoordination
MetaData Task Force
MetaDataImplementation
DatasetDataType
ATL-COM-GEN-2007-003:
ATLAS Dataset Nomenclature


COMA
(Run-level Metadata)
Database Domain Indico Users: Forum
hn-atlas-physicsMetadata

Experts: Forum
atlas-event-metadata

ConditionsMetadata

DataPeriods

COMA Portal
COMA Portal Documentation

JIRA Metadata

TAGs
(Event-level Metadata)
EventTagOverview
EventStore

FastPhysicsTAGMon
FastPhysicsMonitoring
FastPhysMonInterestingEvents

ELSSI - TAG Services Portal

TAG Data Monitoring

AMI
(Dataset-level Metadata)
AtlasMetadataInterface AMI Portal | (CERN replica)
Tutorials
AMIReferenceTables
LinksToAMIPages
pyAMIUserGuide
DataPeriods_pyAMI
AMI/COMA Period Entry
JIRA Metadata
EventIndex Database Domain Indico Users: Forum
hn-atlas-physicsMetadata

Experts: Forum
atlas-db-eventindex

EventIndex
EventIndexProducer
IT.ItHadoop
WebSVN: atlas-atlevind
PandaEIRequests
Tag Collector
(SW release tag management)
SIT
(Software Infrastructure)
Forum
atlas-tagcollector
TagCollectorInAtlas TC Portal
NICOS and
RTT
SIT
(Software Infrastructure)
e-group
Forum
SoftwareValidation
AtlasReleaseValidation
OfflineTestingInfrastructure

ATNightTesting
NightlyBuildSummary

NICOS Nightlies Summary
Nightlies Global Summary

RTT Testing framework
RTT User Guide
RTT Monitoring
RTT Review

BeamSpot Calibration and Alignment hn-atlas-beamspot
Forum
BeamSpot
CoolBeamSpotParameters
BeamSpotTags
InDetBeamSpotFAQ
OnlineBeamSpot
atlas-beamspot.cern.ch/
BeamSpotSummary
Luminosity Lum & Forward Det
Lum Working Group
Plenary
hn-atlas-luminosity-group LuminosityGroup (Main)
LuminosityOnlineSummary
LuminosityOnlineMonitor
LuminosityOnlineCool
LuminosityOffline
BeamConditionsWhiteboardRun3
LHC status (Run3)
Lum Measurment TF
Lum Task Force Report
Lum Det & Forward Phys
Lum Det & Forward Phys
Data
Quality:
DataQuality hn-atlas-DataQuality
hn-atlas-data-quality-dev
hn-atlas-data-quality-operations
DataQuality
CoolDetStatus
DataQualityMonitoring
DataQualityAlgorithms
DQVirtualFlags DQWhiteBoard

DataQualityMonitoring
precomputed GRLs
ATL-COM-GEN-2009-015
ATL-COM-DAPR-2011-010: The ATLAS Data Quality Defect Database System Tier0.Processing.DQ.Monitoring
Trigger Trigger Meetings %atlas-trigger%
e-group
forum
AtlasTrigger
TriggerMenuGlossary
TriggerMenuConvention
MenuPrescales

TriggerTool
TriggerToolUpgrade

TriggerDBSchema
MCTriggerDB
TriggerDBReplication
TriggerPhysicsMenu
TriggerDBSchema

Run3:atlas-triggertool.web.cern.ch/
Run1,2:trigconf.cern.ch/

Savannah atlas-trig
ATLAS-PERF-2011-02-001
Talk 2011: ATLAS Trigger System

Geometry (AtlasDD)
Detector Description New:
atlas-comp-DetectorDescription
e-group forum
Old:
atlas-detector-description
e-group forum
AtlasGeomDBTags
GeomDBReplicaContents
Detector Description
.../project/geom/...
Browser (old: Browser)

ATLAS Detector Description Database
Geometry browser

Tier-0 atlas-tz-ops@cern.ch
Tier-0 Monitoring
Tier 0 DQ Monitoring
Tier-0 Mon TAG
Tier 0 TAG
tasklister

SFO_T0 DB SFOTier0DB

Authorlist Speakers
Publications
-- AtlasResults
PubComHome
ATL-COM-GEN-2010-001
Glance
--
AuthorShipCommittee
glanceAplic
authorship
members.php
Magnetic Field Magnets hn-atlas-magneticField MagneticField
CoolMagneticField
MigrationToNewMagneticField

Pixel Pixel
PixelDcsMeetings
atlas*pixel PixelWiki
PixelDCS
CoralDB(sic)
PixelCOOLoffline
PixelELog

FSI for SCT FSIgroupMeetings atlas-sct-fsi
Forum
FSIforSCT
FSIsystemOperation
FSIMonitoringSystem
FSIDataAndAnalysis
FSIinCOOL
FSI Talks
SCT SCT subsystem %sct% SctWiki
SctEnvSoftware
SctConditionsDB
SctCOOLFolders
SCT
ProdSys Production
System
Project
ProdSys
ProdSys DB
cvs

Distributed
Data
Management
ADC Development
ADC Operations
DistributedDataManagement
DQ2Clients
cvs
Savannah atlas-ddm
DDM Deletion Svc
Panda Distributed Computing Operations hn-atlas-dist-analysis-help Panda
PandaDB
AtlasDAST
Panda Monitor
Savannah Panda
Computer+Operations+Logbook
AGIS
ADC Development hn-atlas-dist-analysis-help AtlasGridInformationSystem
HammerCloudDataAccess
AGIS Main Page
AGIS Guide
savannah: atlas-adc-agis
... more ...
to be added ...
Indico Forum TWiki
Other

LHC Operations


LS2


LS1


ATLAS General


Publication


ATLAS Operations


Monitoring


DB Coordination/DBA


Distributed Database/Analysis Links


CERN CERN CERN


ATLAS Analysis


ATLAS Software and Releases


Data Preparation


ATLAS Computing

Distributed Computing

  • DB Releases

  • Frontier / Squid

    Other Frontier/Squid links:

  • Persistency:

  • ? COOL Browsers ?

  • Conditions Database

  • Grid Certificate Notes

    -- put p12 file in .globus subdirectory
    cd
    mv junk/cert_file4.p12 .globus
    dir -rlt .globus 
    
        -rw-r--r-- 1 gallas atlas 5158 Aug  2 13:41 cert_file4.p12
    
    -- use p12 to create pem files
    
    cd .globus
    PK12_FILE="${HOME}/.globus/cert_file4.p12"
    
    openssl pkcs12 -in ${PK12_FILE} -clcerts -nokeys -out usercert.pem
    
        Enter Import Password:
        MAC verified OK
    
    openssl pkcs12 -in ${PK12_FILE} -nocerts -out userkey.pem
    
        Enter Import Password:
        MAC verified OK
        Enter PEM pass phrase:
        Verifying - Enter PEM pass phrase:
    
    -- give the correct permissions to the files (chmod)
    chmod 400 userkey.pem
    chmod 444 usercert.pem
    
    -- Issue the command (you need to issue this every time you login to use the Grid): 
    
    source /afs/cern.ch/project/gd/LCG-share/current/etc/profile.d/grid_env.sh 
    voms-proxy-init -voms atlas
    
        Enter GRID pass phrase:
        Your identity: /C=UK/O=eScience/OU=Oxford/L=OeSC/CN=elizabeth gallas
        Creating temporary proxy .......................................................... Done
        Contacting  vo.racf.bnl.gov:15003 [/DC=org/DC=doegrids/OU=Services/CN=vo.racf.bnl.gov] "atlas" Done
        Creating proxy ....................................... Done
        Your proxy is valid until Wed Nov 23 23:58:11 2011
    
    
  • pyAMI Notes

    Notes from Fabian:
       "voms-proxy-init -voms atlas" is good
       "voms-proxy-init" is bad
        "voms-proxy-init -voms atlas -rfc" is bad 
    
    source /afs/cern.ch/project/gd/LCG-share/current/etc/profile.d/grid_env.sh 
    voms-proxy-init --voms atlas 
    
    export AtlasSetup=/afs/cern.ch/atlas/software/dist/AtlasSetup
    alias asetup='source $AtlasSetup/scripts/asetup.sh'
    asetup 17.0.5.4
    
    amiCommand GetRunsForDataPeriod -period=N2 -projectName=data11_hi 
    
    

    SVN pyAMI-- old tags (03-05-04 and earlier)

  • POOL and ROOT notes

    -
  • Metadata and related interfaces

  • Simulation MC

  • TAGs

    The ATLAS database application for event level metadata, summarizing each event in less than 1kB to facilitate efficient identification and selection of events for every analysis. Timescale - ongoing ....
  • Outdated ???

  • FDR -- The "Full (formerly 'Final') Dress Rehearsal"

    FDR1 (Feb 2008) and FDR2 (Apr 2008) build upon the Streaming Test experience: simulate, mix, reconstruct, distribute and analyze a data sample roughly equivalent to one day of data-taking.
  • the "Streaming Test"

    Simulate a data sample representing Ten 30 minute runs - the first mixed sample brought through the complete reconstruction and analysis chain (including trigger simulation with Run/LumiBlock data structure). Initiated in 2006, completed in 2007.
    Here is a link to our group's final Report on Data Streaming in ATLAS.
  • Reviews:

  • TWiki Other General Links related to above projects:

  • TWiki Madness:

  • Python:


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    Elizabeth Gallas (ATLAS)
    Last modified: Fri Jan 12 20:20:27 GMT 2024